Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb5Q91XZ5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.29■□□□□ 0.84
Pcdhb5Q91XZ5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb5Q91XZ5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcdhb5Q91XZ5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb5Q91XZ5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb5Q91XZ5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb5Q91XZ5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb5Q91XZ5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb5Q91XZ5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb5Q91XZ5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb5Q91XZ5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Gm27742-201ENSMUST00000184667 60 ntBASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Gm45328-201ENSMUST00000210942 917 ntBASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.27■□□□□ 0.84
Pcdhb5Q91XZ5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.27■□□□□ 0.83
Pcdhb5Q91XZ5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb5Q91XZ5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb5Q91XZ5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb5Q91XZ5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Mir3081-201ENSMUST00000175305 84 ntBASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb5Q91XZ5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb5Q91XZ5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb5Q91XZ5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb5Q91XZ5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb5Q91XZ5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb5Q91XZ5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb5Q91XZ5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb5Q91XZ5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb5Q91XZ5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms