Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Snrnp25Q8VIK1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Snrnp25Q8VIK1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp25Q8VIK1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Snrnp25Q8VIK1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Snrnp25Q8VIK1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Snrnp25Q8VIK1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Snrnp25Q8VIK1 Gm10461-201ENSMUST00000202073 4786 ntBASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp25Q8VIK1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms