Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rab40bQ8VHP8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40bQ8VHP8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Flg-201ENSMUST00000050758 1488 ntBASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Rab40bQ8VHP8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40bQ8VHP8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Rab40bQ8VHP8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rab40bQ8VHP8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rab40bQ8VHP8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rab40bQ8VHP8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rab40bQ8VHP8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rab40bQ8VHP8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40bQ8VHP8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40bQ8VHP8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40bQ8VHP8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40bQ8VHP8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40bQ8VHP8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40bQ8VHP8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rab40bQ8VHP8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40bQ8VHP8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40bQ8VHP8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms