Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkd2Q8VE28 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkd2Q8VE28 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkd2Q8VE28 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkd2Q8VE28 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkd2Q8VE28 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkd2Q8VE28 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Gm18025-201ENSMUST00000221733 862 ntBASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkd2Q8VE28 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Gm38285-201ENSMUST00000192928 922 ntBASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Gm30025-201ENSMUST00000218555 728 ntBASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Odf3b-204ENSMUST00000227834 930 ntBASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Mtag2-201ENSMUST00000058665 714 ntBASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkd2Q8VE28 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.68■□□□□ 0.1
Nkd2Q8VE28 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkd2Q8VE28 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkd2Q8VE28 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkd2Q8VE28 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nkd2Q8VE28 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkd2Q8VE28 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkd2Q8VE28 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nkd2Q8VE28 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkd2Q8VE28 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkd2Q8VE28 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkd2Q8VE28 Mir6349-201ENSMUST00000184059 97 ntBASIC15.66■□□□□ 0.1
Nkd2Q8VE28 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms