Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Gm13884-201ENSMUST00000118103 829 ntBASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Gm11336-201ENSMUST00000118168 334 ntBASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Uhrf1Q8VDF2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Gm43347-201ENSMUST00000200226 580 ntBASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uhrf1Q8VDF2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Uhrf1Q8VDF2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uhrf1Q8VDF2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.69■□□□□ 0.42
Uhrf1Q8VDF2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uhrf1Q8VDF2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Gm13186-201ENSMUST00000118031 316 ntBASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms