Protein–RNA interactions for Protein: Q8VCG9

Rfxap, Regulatory factor X-associated protein, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfxapQ8VCG9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.9□□□□□ -0.18
RfxapQ8VCG9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RfxapQ8VCG9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RfxapQ8VCG9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RfxapQ8VCG9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RfxapQ8VCG9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.87□□□□□ -0.19
RfxapQ8VCG9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.87□□□□□ -0.19
RfxapQ8VCG9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.86□□□□□ -0.19
RfxapQ8VCG9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms