Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Gm18284-201ENSMUST00000172604 624 ntBASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.42■□□□□ 0.38
Slf1Q8R3P9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Gm7514-201ENSMUST00000209475 934 ntBASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slf1Q8R3P9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.4■□□□□ 0.38
Slf1Q8R3P9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slf1Q8R3P9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slf1Q8R3P9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slf1Q8R3P9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Slf1Q8R3P9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slf1Q8R3P9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slf1Q8R3P9 Nespas-201ENSMUST00000143738 1083 ntBASIC17.38■□□□□ 0.37
Slf1Q8R3P9 AV356131-201ENSMUST00000206201 750 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms