Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm45328-201ENSMUST00000210942 917 ntBASIC22.03■■□□□ 1.12
Chmp7Q8R1T1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp7Q8R1T1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC22.03■■□□□ 1.12
Chmp7Q8R1T1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC22.03■■□□□ 1.12
Chmp7Q8R1T1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp7Q8R1T1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp7Q8R1T1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Chmp7Q8R1T1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Chmp7Q8R1T1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Chmp7Q8R1T1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp7Q8R1T1 Gm7153-201ENSMUST00000117092 455 ntBASIC22.01■■□□□ 1.11
Chmp7Q8R1T1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp7Q8R1T1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC22.01■■□□□ 1.11
Chmp7Q8R1T1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp7Q8R1T1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp7Q8R1T1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp7Q8R1T1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp7Q8R1T1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC22■■□□□ 1.11
Chmp7Q8R1T1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Chmp7Q8R1T1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Chmp7Q8R1T1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chmp7Q8R1T1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC22■■□□□ 1.11
Chmp7Q8R1T1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC22■■□□□ 1.11
Chmp7Q8R1T1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC22■■□□□ 1.11
Chmp7Q8R1T1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC22■■□□□ 1.11
Chmp7Q8R1T1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chmp7Q8R1T1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Chmp7Q8R1T1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp7Q8R1T1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp7Q8R1T1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Gm7461-201ENSMUST00000058918 827 ntBASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Chmp7Q8R1T1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp7Q8R1T1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
Chmp7Q8R1T1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 Gm27000-201ENSMUST00000182943 842 ntBASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp7Q8R1T1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp7Q8R1T1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms