Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Mir5130-201ENSMUST00000175160 84 ntBASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Gm16061-201ENSMUST00000122167 857 ntBASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rpp40Q8R1F9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rpp40Q8R1F9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp40Q8R1F9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rpp40Q8R1F9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp40Q8R1F9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpp40Q8R1F9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpp40Q8R1F9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Gm18958-201ENSMUST00000174258 762 ntBASIC18.39■□□□□ 0.53
Rpp40Q8R1F9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms