Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim68Q8K243 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim68Q8K243 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim68Q8K243 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim68Q8K243 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim68Q8K243 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim68Q8K243 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Trim68Q8K243 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim68Q8K243 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim68Q8K243 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.65■□□□□ 0.58
Trim68Q8K243 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim68Q8K243 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim68Q8K243 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim68Q8K243 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim68Q8K243 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim68Q8K243 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim68Q8K243 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim68Q8K243 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim68Q8K243 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim68Q8K243 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Trim68Q8K243 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim68Q8K243 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.64■□□□□ 0.58
Trim68Q8K243 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim68Q8K243 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim68Q8K243 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim68Q8K243 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.64■□□□□ 0.57
Trim68Q8K243 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.64■□□□□ 0.57
Trim68Q8K243 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trim68Q8K243 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim68Q8K243 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim68Q8K243 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim68Q8K243 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim68Q8K243 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim68Q8K243 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim68Q8K243 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim68Q8K243 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim68Q8K243 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim68Q8K243 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim68Q8K243 Gm27704-201ENSMUST00000185094 107 ntBASIC18.62■□□□□ 0.57
Trim68Q8K243 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim68Q8K243 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim68Q8K243 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim68Q8K243 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim68Q8K243 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim68Q8K243 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim68Q8K243 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim68Q8K243 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim68Q8K243 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim68Q8K243 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Trim68Q8K243 Fst-202ENSMUST00000223640 2612 ntBASIC18.62■□□□□ 0.57
Trim68Q8K243 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim68Q8K243 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Trim68Q8K243 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.61■□□□□ 0.57
Trim68Q8K243 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Trim68Q8K243 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim68Q8K243 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trim68Q8K243 Gm28033-201ENSMUST00000184224 96 ntBASIC18.61■□□□□ 0.57
Trim68Q8K243 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim68Q8K243 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim68Q8K243 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trim68Q8K243 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim68Q8K243 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms