Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Rp1l1Q8CGM2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rp1l1Q8CGM2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rp1l1Q8CGM2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rp1l1Q8CGM2 Gm7862-201ENSMUST00000121461 292 ntBASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Gm15165-201ENSMUST00000118140 502 ntBASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rp1l1Q8CGM2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Gm43575-201ENSMUST00000196420 516 ntBASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rp1l1Q8CGM2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Fst-202ENSMUST00000223640 2612 ntBASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rp1l1Q8CGM2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms