Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx6Q8C7R7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rfx6Q8C7R7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx6Q8C7R7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Rfx6Q8C7R7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx6Q8C7R7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rfx6Q8C7R7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx6Q8C7R7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx6Q8C7R7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx6Q8C7R7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Gm27405-201ENSMUST00000184201 112 ntBASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx6Q8C7R7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms