Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Timm23-208ENSMUST00000226683 750 ntBASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim9Q8C7M3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim9Q8C7M3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Gm7638-201ENSMUST00000121348 967 ntBASIC18.95■□□□□ 0.62
Trim9Q8C7M3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim9Q8C7M3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Gm9731-201ENSMUST00000209480 747 ntBASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Odf3b-204ENSMUST00000227834 930 ntBASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim9Q8C7M3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim9Q8C7M3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms