Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.83■□□□□ 0.6
Lin9Q8C735 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lin9Q8C735 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lin9Q8C735 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lin9Q8C735 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lin9Q8C735 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lin9Q8C735 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Lin9Q8C735 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lin9Q8C735 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lin9Q8C735 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.82■□□□□ 0.6
Lin9Q8C735 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lin9Q8C735 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lin9Q8C735 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lin9Q8C735 Gm21814-202ENSMUST00000203277 873 ntBASIC18.82■□□□□ 0.6
Lin9Q8C735 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.82■□□□□ 0.6
Lin9Q8C735 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lin9Q8C735 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lin9Q8C735 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lin9Q8C735 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lin9Q8C735 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lin9Q8C735 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lin9Q8C735 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lin9Q8C735 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.81■□□□□ 0.6
Lin9Q8C735 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.81■□□□□ 0.6
Lin9Q8C735 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.81■□□□□ 0.6
Lin9Q8C735 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lin9Q8C735 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lin9Q8C735 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lin9Q8C735 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.81■□□□□ 0.6
Lin9Q8C735 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lin9Q8C735 Timm23-208ENSMUST00000226683 750 ntBASIC18.81■□□□□ 0.6
Lin9Q8C735 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lin9Q8C735 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lin9Q8C735 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Lin9Q8C735 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lin9Q8C735 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.8■□□□□ 0.6
Lin9Q8C735 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lin9Q8C735 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lin9Q8C735 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lin9Q8C735 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lin9Q8C735 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lin9Q8C735 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.79■□□□□ 0.6
Lin9Q8C735 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lin9Q8C735 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lin9Q8C735 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lin9Q8C735 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.79■□□□□ 0.6
Lin9Q8C735 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.79■□□□□ 0.6
Lin9Q8C735 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.79■□□□□ 0.6
Lin9Q8C735 Odf3b-204ENSMUST00000227834 930 ntBASIC18.79■□□□□ 0.6
Lin9Q8C735 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lin9Q8C735 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lin9Q8C735 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lin9Q8C735 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lin9Q8C735 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lin9Q8C735 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lin9Q8C735 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lin9Q8C735 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.78■□□□□ 0.6
Lin9Q8C735 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lin9Q8C735 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Lin9Q8C735 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lin9Q8C735 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.78■□□□□ 0.6
Lin9Q8C735 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.78■□□□□ 0.6
Lin9Q8C735 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Lin9Q8C735 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lin9Q8C735 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Lin9Q8C735 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lin9Q8C735 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lin9Q8C735 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lin9Q8C735 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lin9Q8C735 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lin9Q8C735 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lin9Q8C735 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lin9Q8C735 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lin9Q8C735 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lin9Q8C735 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lin9Q8C735 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lin9Q8C735 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lin9Q8C735 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lin9Q8C735 Gm10231-201ENSMUST00000181584 441 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms