Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh3rf2Q8BZT2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Sh3rf2Q8BZT2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
Sh3rf2Q8BZT2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh3rf2Q8BZT2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf2Q8BZT2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Gm14859-201ENSMUST00000117752 357 ntBASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Gm9013-201ENSMUST00000132939 882 ntBASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Gm26039-201ENSMUST00000158152 144 ntBASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf2Q8BZT2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.43■□□□□ 0.38
Sh3rf2Q8BZT2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Gm11355-201ENSMUST00000121120 306 ntBASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf2Q8BZT2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Gm7284-201ENSMUST00000131667 944 ntBASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.41■□□□□ 0.38
Sh3rf2Q8BZT2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms