Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Gm15378-201ENSMUST00000121894 207 ntBASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Mir2861-201ENSMUST00000175539 82 ntBASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trerf1Q8BXJ2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trerf1Q8BXJ2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trerf1Q8BXJ2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.08■□□□□ 0.49
Trerf1Q8BXJ2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Trerf1Q8BXJ2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trerf1Q8BXJ2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trerf1Q8BXJ2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trerf1Q8BXJ2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trerf1Q8BXJ2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trerf1Q8BXJ2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trerf1Q8BXJ2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.07■□□□□ 0.48
Trerf1Q8BXJ2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Mir6349-201ENSMUST00000184059 97 ntBASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trerf1Q8BXJ2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trerf1Q8BXJ2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trerf1Q8BXJ2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms