Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Gm27741-201ENSMUST00000185060 237 ntBASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Gm7213-201ENSMUST00000215977 950 ntBASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Usp1Q8BJQ2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp1Q8BJQ2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp1Q8BJQ2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp1Q8BJQ2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Gm9103-201ENSMUST00000119371 405 ntBASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Gm7284-201ENSMUST00000131667 944 ntBASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp1Q8BJQ2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Ank2-226ENSMUST00000189368 339 ntBASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp1Q8BJQ2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp1Q8BJQ2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp1Q8BJQ2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp1Q8BJQ2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms