Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chmp2bQ8BJF9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2bQ8BJF9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2bQ8BJF9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2bQ8BJF9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp2bQ8BJF9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp2bQ8BJF9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp2bQ8BJF9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Chmp2bQ8BJF9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp2bQ8BJF9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.58■□□□□ 0.41
Chmp2bQ8BJF9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Chmp2bQ8BJF9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Gm4968-201ENSMUST00000071458 858 ntBASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms