Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.79■□□□□ 0.28
Pcdh20Q8BIZ0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Gm15378-201ENSMUST00000121894 207 ntBASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdh20Q8BIZ0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh20Q8BIZ0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh20Q8BIZ0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh20Q8BIZ0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh20Q8BIZ0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdh20Q8BIZ0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdh20Q8BIZ0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh20Q8BIZ0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Gm10138-203ENSMUST00000206952 366 ntBASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh20Q8BIZ0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms