Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Gm1401-201ENSMUST00000122048 772 ntBASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trnp1Q80ZI1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Phf7-203ENSMUST00000226565 1971 ntBASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Gm7862-201ENSMUST00000121461 292 ntBASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trnp1Q80ZI1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Rprl3-201ENSMUST00000157400 290 ntBASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Gm6296-201ENSMUST00000222599 943 ntBASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trnp1Q80ZI1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trnp1Q80ZI1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trnp1Q80ZI1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trnp1Q80ZI1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.39■□□□□ 0.7
Trnp1Q80ZI1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Gm13312-201ENSMUST00000119631 718 ntBASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Gm6376-201ENSMUST00000209407 580 ntBASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trnp1Q80ZI1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trnp1Q80ZI1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trnp1Q80ZI1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trnp1Q80ZI1 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.38■□□□□ 0.69
Trnp1Q80ZI1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trnp1Q80ZI1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trnp1Q80ZI1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trnp1Q80ZI1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms