Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp6nlQ80XC3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp6nlQ80XC3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Gm24589-201ENSMUST00000116692 94 ntBASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Gm15794-201ENSMUST00000120182 631 ntBASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp6nlQ80XC3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Gm34391-201ENSMUST00000203706 907 ntBASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp6nlQ80XC3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp6nlQ80XC3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp6nlQ80XC3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms