Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Gm9013-201ENSMUST00000132939 882 ntBASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.81■□□□□ 0.76
Prpf40bQ80W14 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Mir2861-201ENSMUST00000175539 82 ntBASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Gm43514-201ENSMUST00000198852 424 ntBASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf40bQ80W14 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Gm17808-201ENSMUST00000200859 894 ntBASIC19.79■□□□□ 0.76
Prpf40bQ80W14 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf40bQ80W14 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Gm18958-201ENSMUST00000174258 762 ntBASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf40bQ80W14 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf40bQ80W14 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf40bQ80W14 Gm13474-201ENSMUST00000122466 815 ntBASIC19.77■□□□□ 0.76
Prpf40bQ80W14 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.77■□□□□ 0.76
Prpf40bQ80W14 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.77■□□□□ 0.76
Prpf40bQ80W14 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf40bQ80W14 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf40bQ80W14 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf40bQ80W14 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf40bQ80W14 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf40bQ80W14 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms