Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Gm10418-201ENSMUST00000100943 576 ntBASIC16.51■□□□□ 0.23
Otop1Q80VM9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Gm13401-201ENSMUST00000117074 291 ntBASIC16.51■□□□□ 0.23
Otop1Q80VM9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Otop1Q80VM9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.5■□□□□ 0.23
Otop1Q80VM9 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.5■□□□□ 0.23
Otop1Q80VM9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.5■□□□□ 0.23
Otop1Q80VM9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otop1Q80VM9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.49■□□□□ 0.23
Otop1Q80VM9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.49■□□□□ 0.23
Otop1Q80VM9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otop1Q80VM9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otop1Q80VM9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Gm24589-201ENSMUST00000116692 94 ntBASIC16.48■□□□□ 0.23
Otop1Q80VM9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.48■□□□□ 0.23
Otop1Q80VM9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Gm27357-201ENSMUST00000183754 135 ntBASIC16.48■□□□□ 0.23
Otop1Q80VM9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.48■□□□□ 0.23
Otop1Q80VM9 Mzt1-203ENSMUST00000227948 952 ntBASIC16.48■□□□□ 0.23
Otop1Q80VM9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otop1Q80VM9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Otop1Q80VM9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Gm26039-201ENSMUST00000158152 144 ntBASIC16.47■□□□□ 0.23
Otop1Q80VM9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otop1Q80VM9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Otop1Q80VM9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otop1Q80VM9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otop1Q80VM9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.46■□□□□ 0.23
Otop1Q80VM9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otop1Q80VM9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Otop1Q80VM9 Gm6623-201ENSMUST00000173570 544 ntBASIC16.46■□□□□ 0.23
Otop1Q80VM9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms