Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Usp8Q80U87 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Usp8Q80U87 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Usp8Q80U87 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp8Q80U87 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.27■□□□□ 0.35
Usp8Q80U87 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp8Q80U87 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp8Q80U87 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.26■□□□□ 0.35
Usp8Q80U87 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp8Q80U87 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.26■□□□□ 0.35
Usp8Q80U87 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp8Q80U87 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp8Q80U87 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
Usp8Q80U87 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.25■□□□□ 0.35
Usp8Q80U87 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp8Q80U87 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Usp8Q80U87 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.24■□□□□ 0.35
Usp8Q80U87 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp8Q80U87 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.24■□□□□ 0.35
Usp8Q80U87 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp8Q80U87 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp8Q80U87 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Usp8Q80U87 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Usp8Q80U87 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Usp8Q80U87 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp8Q80U87 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Dio3-201ENSMUST00000097228 1449 ntBASIC17.23■□□□□ 0.35
Usp8Q80U87 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms