Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Gm6659-201ENSMUST00000174752 547 ntBASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh19Q80TF3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh19Q80TF3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.89■□□□□ 0.3
Pcdh19Q80TF3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Pcdh19Q80TF3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh19Q80TF3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh19Q80TF3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdh19Q80TF3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh19Q80TF3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh19Q80TF3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms