Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.78■□□□□ 0.28
Scn4bQ7M729 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.77■□□□□ 0.28
Scn4bQ7M729 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn4bQ7M729 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Scn4bQ7M729 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn4bQ7M729 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn4bQ7M729 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn4bQ7M729 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn4bQ7M729 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.76■□□□□ 0.27
Scn4bQ7M729 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn4bQ7M729 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.75■□□□□ 0.27
Scn4bQ7M729 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scn4bQ7M729 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scn4bQ7M729 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn4bQ7M729 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.75■□□□□ 0.27
Scn4bQ7M729 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scn4bQ7M729 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn4bQ7M729 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn4bQ7M729 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn4bQ7M729 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn4bQ7M729 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn4bQ7M729 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn4bQ7M729 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn4bQ7M729 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn4bQ7M729 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Gm10812-201ENSMUST00000099864 546 ntBASIC16.73■□□□□ 0.27
Scn4bQ7M729 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn4bQ7M729 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Gm24841-201ENSMUST00000158676 357 ntBASIC16.72■□□□□ 0.27
Scn4bQ7M729 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.72■□□□□ 0.27
Scn4bQ7M729 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.72■□□□□ 0.27
Scn4bQ7M729 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms