Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 Gm25016-201ENSMUST00000158399 131 ntBASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Npc1l1Q6T3U4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1l1Q6T3U4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Npc1l1Q6T3U4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
Npc1l1Q6T3U4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Npc1l1Q6T3U4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Npc1l1Q6T3U4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Npc1l1Q6T3U4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Npc1l1Q6T3U4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Gm21559-201ENSMUST00000220638 855 ntBASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Gm8587-201ENSMUST00000076538 843 ntBASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1l1Q6T3U4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.56■□□□□ 0.88
Npc1l1Q6T3U4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1l1Q6T3U4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1l1Q6T3U4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1l1Q6T3U4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1l1Q6T3U4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1l1Q6T3U4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1l1Q6T3U4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Npc1l1Q6T3U4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms