Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sp140Q6NSQ5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sp140Q6NSQ5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.45■□□□□ 0.38
Sp140Q6NSQ5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Gm15378-201ENSMUST00000121894 207 ntBASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sp140Q6NSQ5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Gm24841-201ENSMUST00000158676 357 ntBASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sp140Q6NSQ5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms