Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.52■□□□□ 0.55
Retreg2Q6NS82 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.52■□□□□ 0.55
Retreg2Q6NS82 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retreg2Q6NS82 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retreg2Q6NS82 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retreg2Q6NS82 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.52■□□□□ 0.55
Retreg2Q6NS82 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retreg2Q6NS82 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retreg2Q6NS82 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retreg2Q6NS82 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retreg2Q6NS82 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg2Q6NS82 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg2Q6NS82 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Gm30025-201ENSMUST00000218555 728 ntBASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg2Q6NS82 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Retreg2Q6NS82 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms