Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.08■□□□□ 0.96
Pdzrn3Q69ZS0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pdzrn3Q69ZS0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pdzrn3Q69ZS0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdzrn3Q69ZS0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Gm13401-201ENSMUST00000117074 291 ntBASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdzrn3Q69ZS0 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdzrn3Q69ZS0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pdzrn3Q69ZS0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pdzrn3Q69ZS0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Gm17971-201ENSMUST00000190239 806 ntBASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdzrn3Q69ZS0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pdzrn3Q69ZS0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.02■□□□□ 0.95
Pdzrn3Q69ZS0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Pdzrn3Q69ZS0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms