Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SspnQ62147 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SspnQ62147 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SspnQ62147 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.41□□□□□ -0.1
SspnQ62147 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SspnQ62147 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SspnQ62147 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.4□□□□□ -0.1
SspnQ62147 Mir2861-201ENSMUST00000175539 82 ntBASIC14.4□□□□□ -0.1
SspnQ62147 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.4□□□□□ -0.1
SspnQ62147 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SspnQ62147 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.4□□□□□ -0.1
SspnQ62147 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SspnQ62147 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SspnQ62147 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.39□□□□□ -0.11
SspnQ62147 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SspnQ62147 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
SspnQ62147 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.39□□□□□ -0.11
SspnQ62147 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.39□□□□□ -0.11
SspnQ62147 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SspnQ62147 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SspnQ62147 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.38□□□□□ -0.11
SspnQ62147 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.38□□□□□ -0.11
SspnQ62147 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.38□□□□□ -0.11
SspnQ62147 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.38□□□□□ -0.11
SspnQ62147 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.38□□□□□ -0.11
SspnQ62147 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SspnQ62147 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.38□□□□□ -0.11
SspnQ62147 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.38□□□□□ -0.11
SspnQ62147 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.38□□□□□ -0.11
SspnQ62147 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SspnQ62147 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.38□□□□□ -0.11
SspnQ62147 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SspnQ62147 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SspnQ62147 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SspnQ62147 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SspnQ62147 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SspnQ62147 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SspnQ62147 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SspnQ62147 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SspnQ62147 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.37□□□□□ -0.11
SspnQ62147 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SspnQ62147 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.37□□□□□ -0.11
SspnQ62147 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.37□□□□□ -0.11
SspnQ62147 Gm10138-203ENSMUST00000206952 366 ntBASIC14.37□□□□□ -0.11
SspnQ62147 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SspnQ62147 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.37□□□□□ -0.11
SspnQ62147 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SspnQ62147 Dio3-201ENSMUST00000097228 1449 ntBASIC14.37□□□□□ -0.11
SspnQ62147 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms