Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.95■□□□□ 0.46
Smarcd1Q61466 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd1Q61466 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd1Q61466 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd1Q61466 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Smarcd1Q61466 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Smarcd1Q61466 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smarcd1Q61466 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smarcd1Q61466 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd1Q61466 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.94■□□□□ 0.46
Smarcd1Q61466 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Gm18958-201ENSMUST00000174258 762 ntBASIC17.94■□□□□ 0.46
Smarcd1Q61466 Gm7977-201ENSMUST00000193787 748 ntBASIC17.94■□□□□ 0.46
Smarcd1Q61466 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.94■□□□□ 0.46
Smarcd1Q61466 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Smarcd1Q61466 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd1Q61466 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Smarcd1Q61466 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Gm18032-201ENSMUST00000222541 538 ntBASIC17.92■□□□□ 0.46
Smarcd1Q61466 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd1Q61466 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.91■□□□□ 0.46
Smarcd1Q61466 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.91■□□□□ 0.46
Smarcd1Q61466 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.9■□□□□ 0.46
Smarcd1Q61466 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd1Q61466 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms