Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cln3Q61124 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.88■□□□□ 0.61
Cln3Q61124 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cln3Q61124 Gm13186-201ENSMUST00000118031 316 ntBASIC18.87■□□□□ 0.61
Cln3Q61124 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cln3Q61124 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cln3Q61124 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cln3Q61124 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cln3Q61124 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Cln3Q61124 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Cln3Q61124 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Cln3Q61124 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.87■□□□□ 0.61
Cln3Q61124 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cln3Q61124 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.87■□□□□ 0.61
Cln3Q61124 Phf7-203ENSMUST00000226565 1971 ntBASIC18.87■□□□□ 0.61
Cln3Q61124 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cln3Q61124 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cln3Q61124 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cln3Q61124 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cln3Q61124 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cln3Q61124 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.86■□□□□ 0.61
Cln3Q61124 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.86■□□□□ 0.61
Cln3Q61124 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cln3Q61124 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Mzt1-203ENSMUST00000227948 952 ntBASIC18.86■□□□□ 0.61
Cln3Q61124 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln3Q61124 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.85■□□□□ 0.61
Cln3Q61124 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.85■□□□□ 0.61
Cln3Q61124 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.85■□□□□ 0.61
Cln3Q61124 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cln3Q61124 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln3Q61124 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.84■□□□□ 0.61
Cln3Q61124 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln3Q61124 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cln3Q61124 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cln3Q61124 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cln3Q61124 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cln3Q61124 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cln3Q61124 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.83■□□□□ 0.61
Cln3Q61124 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cln3Q61124 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.83■□□□□ 0.6
Cln3Q61124 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.83■□□□□ 0.6
Cln3Q61124 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cln3Q61124 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cln3Q61124 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.83■□□□□ 0.6
Cln3Q61124 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Cln3Q61124 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.82■□□□□ 0.6
Cln3Q61124 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Gm12895-201ENSMUST00000122214 226 ntBASIC18.82■□□□□ 0.6
Cln3Q61124 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms