Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gm12382-201ENSMUST00000122005 922 ntBASIC16.25■□□□□ 0.19
Ripk1Q60855 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.25■□□□□ 0.19
Ripk1Q60855 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Gm37292-201ENSMUST00000192062 758 ntBASIC16.25■□□□□ 0.19
Ripk1Q60855 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ripk1Q60855 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.25■□□□□ 0.19
Ripk1Q60855 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ripk1Q60855 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ripk1Q60855 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ripk1Q60855 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ripk1Q60855 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ripk1Q60855 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.24■□□□□ 0.19
Ripk1Q60855 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ripk1Q60855 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ripk1Q60855 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ripk1Q60855 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ripk1Q60855 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.24■□□□□ 0.19
Ripk1Q60855 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ripk1Q60855 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Ripk1Q60855 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.23■□□□□ 0.19
Ripk1Q60855 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Ripk1Q60855 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.23■□□□□ 0.19
Ripk1Q60855 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ripk1Q60855 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ripk1Q60855 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ripk1Q60855 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ripk1Q60855 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ripk1Q60855 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ripk1Q60855 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.22■□□□□ 0.19
Ripk1Q60855 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.22■□□□□ 0.19
Ripk1Q60855 Gm15378-201ENSMUST00000121894 207 ntBASIC16.22■□□□□ 0.19
Ripk1Q60855 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.22■□□□□ 0.19
Ripk1Q60855 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.22■□□□□ 0.19
Ripk1Q60855 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.22■□□□□ 0.19
Ripk1Q60855 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk1Q60855 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.21■□□□□ 0.19
Ripk1Q60855 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ripk1Q60855 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.21■□□□□ 0.19
Ripk1Q60855 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Ripk1Q60855 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.21■□□□□ 0.19
Ripk1Q60855 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ripk1Q60855 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Gm43183-201ENSMUST00000200632 547 ntBASIC16.21■□□□□ 0.19
Ripk1Q60855 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ripk1Q60855 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.21■□□□□ 0.19
Ripk1Q60855 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ripk1Q60855 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ripk1Q60855 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk1Q60855 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ripk1Q60855 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ripk1Q60855 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Ripk1Q60855 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.21■□□□□ 0.18
Ripk1Q60855 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk1Q60855 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ripk1Q60855 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms