Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Gm11927-201ENSMUST00000118472 759 ntBASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Gm5408-201ENSMUST00000197998 747 ntBASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-3Q5R1I1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Mir2861-201ENSMUST00000175539 82 ntBASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Mir6349-201ENSMUST00000184059 97 ntBASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Mir8112-201ENSMUST00000184382 131 ntBASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Gm2559-201ENSMUST00000201323 363 ntBASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Gm4968-201ENSMUST00000071458 858 ntBASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Trav7d-3Q5R1I1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav7d-3Q5R1I1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav7d-3Q5R1I1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.65□□□□□ -0.39
Trav7d-3Q5R1I1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav7d-3Q5R1I1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Gm11643-201ENSMUST00000119578 864 ntBASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms