Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Gm13836-201ENSMUST00000121159 501 ntBASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Gm2274-201ENSMUST00000184539 609 ntBASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.82■□□□□ 0.6
Scarf1Q5ND28 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.82■□□□□ 0.6
Scarf1Q5ND28 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Gm10231-201ENSMUST00000181584 441 ntBASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Gm10175-202ENSMUST00000208752 441 ntBASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarf1Q5ND28 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarf1Q5ND28 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Gm27000-201ENSMUST00000182943 842 ntBASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scarf1Q5ND28 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Gm45058-201ENSMUST00000205810 766 ntBASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Gm18959-201ENSMUST00000208954 655 ntBASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scarf1Q5ND28 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scarf1Q5ND28 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Scarf1Q5ND28 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scarf1Q5ND28 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms