Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Actl10-202ENSMUST00000226583 1501 ntBASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Gm27389-201ENSMUST00000183622 195 ntBASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Gm10819-201ENSMUST00000099988 561 ntBASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Gm7367-201ENSMUST00000057611 492 ntBASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h1Q4VGL6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h1Q4VGL6 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Gm26039-201ENSMUST00000158152 144 ntBASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Gm18958-201ENSMUST00000174258 762 ntBASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rc3h1Q4VGL6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rc3h1Q4VGL6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Gm27000-201ENSMUST00000182943 842 ntBASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Gm33142-201ENSMUST00000193913 867 ntBASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h1Q4VGL6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rc3h1Q4VGL6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rc3h1Q4VGL6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rc3h1Q4VGL6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rc3h1Q4VGL6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rc3h1Q4VGL6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Rc3h1Q4VGL6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms