Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Gm21362-201ENSMUST00000194272 928 ntBASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Gm37025-201ENSMUST00000195159 829 ntBASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Gm7367-201ENSMUST00000057611 492 ntBASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smcr8Q3UMB5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 AA414768-201ENSMUST00000121924 1257 ntBASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smcr8Q3UMB5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Idnk-204ENSMUST00000226010 1898 ntBASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Gm9731-201ENSMUST00000209480 747 ntBASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smcr8Q3UMB5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Gm13474-201ENSMUST00000122466 815 ntBASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smcr8Q3UMB5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smcr8Q3UMB5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
Smcr8Q3UMB5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smcr8Q3UMB5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms