Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Gm7638-201ENSMUST00000121348 967 ntBASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Gm37025-201ENSMUST00000195159 829 ntBASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdnep1Q3TP92 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdnep1Q3TP92 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdnep1Q3TP92 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.83■□□□□ 0.76
Ctdnep1Q3TP92 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdnep1Q3TP92 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdnep1Q3TP92 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdnep1Q3TP92 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdnep1Q3TP92 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.83■□□□□ 0.76
Ctdnep1Q3TP92 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ctdnep1Q3TP92 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdnep1Q3TP92 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ctdnep1Q3TP92 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctdnep1Q3TP92 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctdnep1Q3TP92 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms