Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3KNL4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3KNL4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3KNL4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3KNL4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3KNL4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3KNL4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Q3KNL4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3KNL4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Q3KNL4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3KNL4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Q3KNL4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Q3KNL4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.94■□□□□ 0.3
Q3KNL4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3KNL4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Q3KNL4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Q3KNL4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3KNL4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Q3KNL4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.94■□□□□ 0.3
Q3KNL4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Q3KNL4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.94■□□□□ 0.3
Q3KNL4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Q3KNL4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Q3KNL4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.93■□□□□ 0.3
Q3KNL4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Q3KNL4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Q3KNL4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Q3KNL4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Q3KNL4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Q3KNL4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.93■□□□□ 0.3
Q3KNL4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q3KNL4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.92■□□□□ 0.3
Q3KNL4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Q3KNL4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Q3KNL4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Q3KNL4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Q3KNL4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Q3KNL4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Q3KNL4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.92■□□□□ 0.3
Q3KNL4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q3KNL4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Q3KNL4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Q3KNL4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.91■□□□□ 0.3
Q3KNL4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.91■□□□□ 0.3
Q3KNL4 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.91■□□□□ 0.3
Q3KNL4 Gm13401-201ENSMUST00000117074 291 ntBASIC16.91■□□□□ 0.3
Q3KNL4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.91■□□□□ 0.3
Q3KNL4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.91■□□□□ 0.3
Q3KNL4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Q3KNL4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Gm10602-201ENSMUST00000098239 609 ntBASIC16.91■□□□□ 0.3
Q3KNL4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.91■□□□□ 0.3
Q3KNL4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Q3KNL4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Q3KNL4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Q3KNL4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q3KNL4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.9■□□□□ 0.3
Q3KNL4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Q3KNL4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Q3KNL4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms