Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col17a1Q07563 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC26.61■■□□□ 1.85
Col17a1Q07563 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col17a1Q07563 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Col17a1Q07563 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Col17a1Q07563 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col17a1Q07563 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Col17a1Q07563 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col17a1Q07563 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col17a1Q07563 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Col17a1Q07563 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col17a1Q07563 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC26.6■■□□□ 1.85
Col17a1Q07563 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col17a1Q07563 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col17a1Q07563 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col17a1Q07563 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col17a1Q07563 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Col17a1Q07563 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col17a1Q07563 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col17a1Q07563 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col17a1Q07563 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col17a1Q07563 Gm13186-201ENSMUST00000118031 316 ntBASIC26.59■■□□□ 1.85
Col17a1Q07563 Gm12428-201ENSMUST00000119844 727 ntBASIC26.59■■□□□ 1.85
Col17a1Q07563 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col17a1Q07563 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC26.59■■□□□ 1.85
Col17a1Q07563 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC26.59■■□□□ 1.85
Col17a1Q07563 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col17a1Q07563 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC26.59■■□□□ 1.85
Col17a1Q07563 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col17a1Q07563 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Col17a1Q07563 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col17a1Q07563 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col17a1Q07563 H2-Pa-201ENSMUST00000182803 626 ntBASIC26.58■■□□□ 1.85
Col17a1Q07563 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Col17a1Q07563 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col17a1Q07563 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Col17a1Q07563 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col17a1Q07563 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col17a1Q07563 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col17a1Q07563 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
Col17a1Q07563 AC154757.1-201ENSMUST00000228289 336 ntBASIC26.57■■□□□ 1.84
Col17a1Q07563 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col17a1Q07563 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col17a1Q07563 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Col17a1Q07563 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col17a1Q07563 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col17a1Q07563 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col17a1Q07563 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col17a1Q07563 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC26.56■■□□□ 1.84
Col17a1Q07563 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Col17a1Q07563 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col17a1Q07563 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC26.56■■□□□ 1.84
Col17a1Q07563 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC26.56■■□□□ 1.84
Col17a1Q07563 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col17a1Q07563 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Col17a1Q07563 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Col17a1Q07563 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Col17a1Q07563 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC26.56■■□□□ 1.84
Col17a1Q07563 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC26.55■■□□□ 1.84
Col17a1Q07563 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Col17a1Q07563 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC26.55■■□□□ 1.84
Col17a1Q07563 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Col17a1Q07563 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col17a1Q07563 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col17a1Q07563 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC26.55■■□□□ 1.84
Col17a1Q07563 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC26.55■■□□□ 1.84
Col17a1Q07563 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC26.55■■□□□ 1.84
Col17a1Q07563 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Col17a1Q07563 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC26.55■■□□□ 1.84
Col17a1Q07563 Gm7229-201ENSMUST00000214719 1007 ntBASIC26.55■■□□□ 1.84
Col17a1Q07563 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Col17a1Q07563 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Col17a1Q07563 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col17a1Q07563 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Col17a1Q07563 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Col17a1Q07563 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col17a1Q07563 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Col17a1Q07563 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Col17a1Q07563 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC26.54■■□□□ 1.84
Col17a1Q07563 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Col17a1Q07563 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Col17a1Q07563 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC26.54■■□□□ 1.84
Col17a1Q07563 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Col17a1Q07563 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col17a1Q07563 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Col17a1Q07563 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col17a1Q07563 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Col17a1Q07563 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 Gm11764-201ENSMUST00000120221 623 ntBASIC26.53■■□□□ 1.84
Col17a1Q07563 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 Gm7506-201ENSMUST00000207758 815 ntBASIC26.53■■□□□ 1.84
Col17a1Q07563 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col17a1Q07563 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms