Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx4Q07424 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdx4Q07424 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdx4Q07424 Gm10698-201ENSMUST00000182663 604 ntBASIC13.31□□□□□ -0.28
Cdx4Q07424 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.31□□□□□ -0.28
Cdx4Q07424 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.31□□□□□ -0.28
Cdx4Q07424 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.31□□□□□ -0.28
Cdx4Q07424 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdx4Q07424 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdx4Q07424 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Cdx4Q07424 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx4Q07424 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdx4Q07424 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdx4Q07424 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cdx4Q07424 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Cdx4Q07424 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdx4Q07424 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdx4Q07424 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdx4Q07424 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdx4Q07424 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx4Q07424 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.29□□□□□ -0.28
Cdx4Q07424 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdx4Q07424 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdx4Q07424 Mir6349-201ENSMUST00000184059 97 ntBASIC13.29□□□□□ -0.28
Cdx4Q07424 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.29□□□□□ -0.28
Cdx4Q07424 Gm10138-203ENSMUST00000206952 366 ntBASIC13.29□□□□□ -0.28
Cdx4Q07424 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdx4Q07424 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdx4Q07424 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cdx4Q07424 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdx4Q07424 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdx4Q07424 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.29□□□□□ -0.28
Cdx4Q07424 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx4Q07424 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.28□□□□□ -0.28
Cdx4Q07424 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms