Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43bP86448 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim43bP86448 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim43bP86448 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.69■□□□□ 0.42
Trim43bP86448 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim43bP86448 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim43bP86448 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim43bP86448 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43bP86448 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim43bP86448 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim43bP86448 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim43bP86448 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim43bP86448 Gm27275-201ENSMUST00000184318 272 ntBASIC17.68■□□□□ 0.42
Trim43bP86448 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Trim43bP86448 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim43bP86448 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim43bP86448 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43bP86448 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.67■□□□□ 0.42
Trim43bP86448 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim43bP86448 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim43bP86448 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim43bP86448 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Trim43bP86448 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim43bP86448 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43bP86448 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim43bP86448 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.66■□□□□ 0.42
Trim43bP86448 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim43bP86448 Gm11249-201ENSMUST00000117071 859 ntBASIC17.66■□□□□ 0.42
Trim43bP86448 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Trim43bP86448 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.66■□□□□ 0.42
Trim43bP86448 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.66■□□□□ 0.42
Trim43bP86448 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim43bP86448 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim43bP86448 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43bP86448 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Gm13158-201ENSMUST00000122007 736 ntBASIC17.65■□□□□ 0.42
Trim43bP86448 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim43bP86448 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim43bP86448 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.65■□□□□ 0.42
Trim43bP86448 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim43bP86448 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms