Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb1P70662 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.15■□□□□ 0.34
Ldb1P70662 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ldb1P70662 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb1P70662 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb1P70662 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb1P70662 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Ldb1P70662 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.14■□□□□ 0.33
Ldb1P70662 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Ldb1P70662 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.14■□□□□ 0.33
Ldb1P70662 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.14■□□□□ 0.33
Ldb1P70662 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.14■□□□□ 0.33
Ldb1P70662 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.14■□□□□ 0.33
Ldb1P70662 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb1P70662 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.14■□□□□ 0.33
Ldb1P70662 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ldb1P70662 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.13■□□□□ 0.33
Ldb1P70662 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Ldb1P70662 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ldb1P70662 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Gm8520-201ENSMUST00000186517 868 ntBASIC17.13■□□□□ 0.33
Ldb1P70662 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.13■□□□□ 0.33
Ldb1P70662 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ldb1P70662 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb1P70662 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Ldb1P70662 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
Ldb1P70662 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.12■□□□□ 0.33
Ldb1P70662 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ldb1P70662 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ldb1P70662 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ldb1P70662 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb1P70662 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.12■□□□□ 0.33
Ldb1P70662 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb1P70662 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ldb1P70662 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb1P70662 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb1P70662 Mir1199-201ENSMUST00000117015 119 ntBASIC17.11■□□□□ 0.33
Ldb1P70662 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.11■□□□□ 0.33
Ldb1P70662 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb1P70662 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb1P70662 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ldb1P70662 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb1P70662 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.11■□□□□ 0.33
Ldb1P70662 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb1P70662 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb1P70662 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.1■□□□□ 0.33
Ldb1P70662 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ldb1P70662 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Gm24841-201ENSMUST00000158676 357 ntBASIC17.1■□□□□ 0.33
Ldb1P70662 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.1■□□□□ 0.33
Ldb1P70662 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.1■□□□□ 0.33
Ldb1P70662 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.1■□□□□ 0.33
Ldb1P70662 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 164 ms