Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.05■□□□□ 0.32
Crnkl1P63154 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.05■□□□□ 0.32
Crnkl1P63154 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.05■□□□□ 0.32
Crnkl1P63154 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.05■□□□□ 0.32
Crnkl1P63154 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Crnkl1P63154 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Crnkl1P63154 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.04■□□□□ 0.32
Crnkl1P63154 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.04■□□□□ 0.32
Crnkl1P63154 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Crnkl1P63154 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Crnkl1P63154 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Crnkl1P63154 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crnkl1P63154 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.03■□□□□ 0.32
Crnkl1P63154 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.03■□□□□ 0.32
Crnkl1P63154 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.03■□□□□ 0.32
Crnkl1P63154 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Crnkl1P63154 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Crnkl1P63154 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crnkl1P63154 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.03■□□□□ 0.32
Crnkl1P63154 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.03■□□□□ 0.32
Crnkl1P63154 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Crnkl1P63154 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Crnkl1P63154 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Crnkl1P63154 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Crnkl1P63154 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Crnkl1P63154 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Crnkl1P63154 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.02■□□□□ 0.31
Crnkl1P63154 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Crnkl1P63154 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Crnkl1P63154 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Crnkl1P63154 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Crnkl1P63154 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Crnkl1P63154 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.01■□□□□ 0.31
Crnkl1P63154 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Crnkl1P63154 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Crnkl1P63154 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.01■□□□□ 0.31
Crnkl1P63154 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.01■□□□□ 0.31
Crnkl1P63154 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.01■□□□□ 0.31
Crnkl1P63154 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Crnkl1P63154 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Crnkl1P63154 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.01■□□□□ 0.31
Crnkl1P63154 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Crnkl1P63154 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms