Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rpl39P62892 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rpl39P62892 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rpl39P62892 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpl39P62892 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpl39P62892 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.32□□□□□ -0.44
Rpl39P62892 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.32□□□□□ -0.44
Rpl39P62892 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rpl39P62892 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.32□□□□□ -0.44
Rpl39P62892 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpl39P62892 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl39P62892 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rpl39P62892 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpl39P62892 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpl39P62892 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Rpl39P62892 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rpl39P62892 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rpl39P62892 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl39P62892 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Rpl39P62892 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rpl39P62892 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpl39P62892 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.3□□□□□ -0.44
Rpl39P62892 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Gm13234-201ENSMUST00000120010 747 ntBASIC12.3□□□□□ -0.44
Rpl39P62892 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.3□□□□□ -0.44
Rpl39P62892 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.3□□□□□ -0.44
Rpl39P62892 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpl39P62892 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpl39P62892 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Rpl39P62892 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpl39P62892 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.3□□□□□ -0.44
Rpl39P62892 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl39P62892 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpl39P62892 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpl39P62892 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms