Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sssca1P56873 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.94□□□□□ -0.18
Sssca1P56873 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sssca1P56873 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Sssca1P56873 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sssca1P56873 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sssca1P56873 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Gm7291-201ENSMUST00000199147 382 ntBASIC13.93□□□□□ -0.18
Sssca1P56873 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.93□□□□□ -0.18
Sssca1P56873 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sssca1P56873 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.92□□□□□ -0.18
Sssca1P56873 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.92□□□□□ -0.18
Sssca1P56873 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.92□□□□□ -0.18
Sssca1P56873 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sssca1P56873 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 AV356131-201ENSMUST00000206201 750 ntBASIC13.92□□□□□ -0.18
Sssca1P56873 Zfp783-201ENSMUST00000095946 670 ntBASIC13.92□□□□□ -0.18
Sssca1P56873 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.92□□□□□ -0.18
Sssca1P56873 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sssca1P56873 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sssca1P56873 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sssca1P56873 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.91□□□□□ -0.18
Sssca1P56873 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
Sssca1P56873 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.91□□□□□ -0.18
Sssca1P56873 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
Sssca1P56873 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sssca1P56873 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sssca1P56873 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Sssca1P56873 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.91□□□□□ -0.18
Sssca1P56873 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sssca1P56873 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Sssca1P56873 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sssca1P56873 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Sssca1P56873 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sssca1P56873 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms