Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.62■□□□□ 0.25
Lbx1P52955 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.62■□□□□ 0.25
Lbx1P52955 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Lbx1P52955 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.61■□□□□ 0.25
Lbx1P52955 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lbx1P52955 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lbx1P52955 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lbx1P52955 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lbx1P52955 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.6■□□□□ 0.25
Lbx1P52955 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.6■□□□□ 0.25
Lbx1P52955 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Lbx1P52955 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.6■□□□□ 0.25
Lbx1P52955 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.6■□□□□ 0.25
Lbx1P52955 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lbx1P52955 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lbx1P52955 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lbx1P52955 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lbx1P52955 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lbx1P52955 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.59■□□□□ 0.25
Lbx1P52955 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.59■□□□□ 0.25
Lbx1P52955 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Lbx1P52955 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.59■□□□□ 0.25
Lbx1P52955 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lbx1P52955 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.59■□□□□ 0.25
Lbx1P52955 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lbx1P52955 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lbx1P52955 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Lbx1P52955 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lbx1P52955 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lbx1P52955 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.58■□□□□ 0.25
Lbx1P52955 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lbx1P52955 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lbx1P52955 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lbx1P52955 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Lbx1P52955 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.58■□□□□ 0.24
Lbx1P52955 Gm11424-201ENSMUST00000121929 829 ntBASIC16.58■□□□□ 0.24
Lbx1P52955 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Gm27867-201ENSMUST00000184778 125 ntBASIC16.58■□□□□ 0.24
Lbx1P52955 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.58■□□□□ 0.24
Lbx1P52955 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Lbx1P52955 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.58■□□□□ 0.24
Lbx1P52955 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lbx1P52955 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Lbx1P52955 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lbx1P52955 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lbx1P52955 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lbx1P52955 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lbx1P52955 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lbx1P52955 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lbx1P52955 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lbx1P52955 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lbx1P52955 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lbx1P52955 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms