Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nedd4P46935 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nedd4P46935 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nedd4P46935 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.71■□□□□ 0.91
Nedd4P46935 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd4P46935 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Nedd4P46935 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.7■□□□□ 0.9
Nedd4P46935 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd4P46935 Gm11779-201ENSMUST00000118541 368 ntBASIC20.7■□□□□ 0.9
Nedd4P46935 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.7■□□□□ 0.9
Nedd4P46935 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd4P46935 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd4P46935 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd4P46935 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd4P46935 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd4P46935 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd4P46935 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nedd4P46935 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.69■□□□□ 0.9
Nedd4P46935 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Nedd4P46935 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.69■□□□□ 0.9
Nedd4P46935 Gm6736-201ENSMUST00000166583 948 ntBASIC20.69■□□□□ 0.9
Nedd4P46935 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.69■□□□□ 0.9
Nedd4P46935 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nedd4P46935 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd4P46935 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.69■□□□□ 0.9
Nedd4P46935 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.68■□□□□ 0.9
Nedd4P46935 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.68■□□□□ 0.9
Nedd4P46935 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.68■□□□□ 0.9
Nedd4P46935 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Nedd4P46935 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd4P46935 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nedd4P46935 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.67■□□□□ 0.9
Nedd4P46935 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nedd4P46935 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nedd4P46935 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nedd4P46935 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.67■□□□□ 0.9
Nedd4P46935 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.67■□□□□ 0.9
Nedd4P46935 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.67■□□□□ 0.9
Nedd4P46935 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nedd4P46935 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nedd4P46935 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd4P46935 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.67■□□□□ 0.9
Nedd4P46935 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.67■□□□□ 0.9
Nedd4P46935 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nedd4P46935 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd4P46935 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd4P46935 Gm10060-201ENSMUST00000212002 111 ntBASIC20.66■□□□□ 0.9
Nedd4P46935 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.66■□□□□ 0.9
Nedd4P46935 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd4P46935 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd4P46935 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nedd4P46935 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nedd4P46935 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nedd4P46935 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd4P46935 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd4P46935 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd4P46935 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd4P46935 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd4P46935 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nedd4P46935 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Nedd4P46935 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4P46935 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms