Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm10566-201ENSMUST00000086739 996 ntBASIC16.46■□□□□ 0.23
Sox18P43680 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.46■□□□□ 0.23
Sox18P43680 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.46■□□□□ 0.23
Sox18P43680 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox18P43680 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox18P43680 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sox18P43680 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Sox18P43680 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sox18P43680 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.45■□□□□ 0.22
Sox18P43680 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Sox18P43680 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sox18P43680 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sox18P43680 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.44■□□□□ 0.22
Sox18P43680 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.44■□□□□ 0.22
Sox18P43680 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.44■□□□□ 0.22
Sox18P43680 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.44■□□□□ 0.22
Sox18P43680 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sox18P43680 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.44■□□□□ 0.22
Sox18P43680 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox18P43680 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sox18P43680 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Sox18P43680 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox18P43680 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox18P43680 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Gm37025-201ENSMUST00000195159 829 ntBASIC16.43■□□□□ 0.22
Sox18P43680 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.43■□□□□ 0.22
Sox18P43680 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Sox18P43680 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Sox18P43680 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sox18P43680 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sox18P43680 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sox18P43680 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox18P43680 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Sox18P43680 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox18P43680 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sox18P43680 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.42■□□□□ 0.22
Sox18P43680 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox18P43680 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.42■□□□□ 0.22
Sox18P43680 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox18P43680 Gm11452-201ENSMUST00000122376 690 ntBASIC16.42■□□□□ 0.22
Sox18P43680 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.42■□□□□ 0.22
Sox18P43680 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox18P43680 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox18P43680 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox18P43680 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox18P43680 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Sox18P43680 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.42■□□□□ 0.22
Sox18P43680 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox18P43680 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Sox18P43680 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.41■□□□□ 0.22
Sox18P43680 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sox18P43680 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sox18P43680 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox18P43680 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sox18P43680 Gm12895-201ENSMUST00000122214 226 ntBASIC16.41■□□□□ 0.22
Sox18P43680 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms